Task 527748


Deprecated: Implicit conversion from float-string "17009.02" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424

Deprecated: Implicit conversion from float-string "17009.02" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424
Name ebola_RdRp_v1_sidock_00835333_r6_s-24.0_0
Workunit 461419
Created 12 Sep 2026, 2:01:24 UTC
Sent 12 Sep 2026, 7:18:06 UTC
Report deadline 16 Sep 2026, 7:18:06 UTC
Received 13 Sep 2026, 6:11:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 77581
Run time 4 hours 43 min 29 sec
CPU time 4 hours 43 min 29 sec
Validate state Valid
Credit 728.04
Device peak FLOPS 11.93 GFLOPS
Application version SiDock@home CurieMarieDock v1.00
x86_64-pc-linux-gnu
Peak working set size 240.77 MB
Peak swap size 247.84 MB
Peak disk usage 20.31 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:25:55 (2717002): wrapper (7.17.26016): starting
02:25:55 (2717002): wrapper (7.17.26016): starting
02:25:55 (2717002): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x57809283ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b8ccd045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7b8ccd09ec0c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7b8ccd04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7b8ccd0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7b8ccd0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa90d5)[0x7b8ccd0a90d5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab46c)[0x7b8ccd0ab46c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7b8ccd0adeae]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x57809285c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x57809287b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b8ccd045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b8ccd0ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b8ccd0f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b8ccd1299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x578092851adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x57809281e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b8ccd02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b8ccd02a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x57809281aa3a]

Exiting...
13:37:40 (180544): wrapper (7.17.26016): starting
13:37:41 (180544): wrapper (7.17.26016): starting
13:37:41 (180544): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x58d96563ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7662c5245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7662c529ec0c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7662c524527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7662c52288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7662c52297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa90d5)[0x7662c52a90d5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab46c)[0x7662c52ab46c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7662c52adeae]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x58d96565c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x58d96567b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7662c5245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7662c52ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7662c52f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7662c53299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x58d965651adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x58d96561e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7662c522a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7662c522a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x58d96561aa3a]

Exiting...
13:52:46 (1908): wrapper (7.17.26016): starting
13:52:46 (1908): wrapper (7.17.26016): starting
13:52:46 (1908): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5710ff03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c3902e45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7c3902eade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5710ff05c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5710ff07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c3902e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c3902eecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c3902ef9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c3902f299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5710ff051adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5710ff01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c3902e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c3902e2a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5710ff01aa3a]

Exiting...
14:47:43 (1898): wrapper (7.17.26016): starting
14:47:43 (1898): wrapper (7.17.26016): starting
14:47:43 (1898): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x59eba483ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77f41e445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x77f41e4ade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x59eba485c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x59eba487b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77f41e445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77f41e4ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77f41e4f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77f41e5299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x59eba4851adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x59eba481e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77f41e42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77f41e42a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x59eba481aa3a]

Exiting...
18:03:59 (1905): wrapper (7.17.26016): starting
18:03:59 (1905): wrapper (7.17.26016): starting
18:03:59 (1905): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x596106c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d95f8645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7d95f86ade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x596106c5c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x596106c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d95f8645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d95f86ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d95f86f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d95f87299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x596106c51adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x596106c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d95f862a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d95f862a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x596106c1aa3a]

Exiting...
19:11:20 (1888): wrapper (7.17.26016): starting
19:11:20 (1888): wrapper (7.17.26016): starting
19:11:20 (1888): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d506b23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b3aa4845330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7b3aa48ade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d506b25c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d506b27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b3aa4845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b3aa48ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b3aa48f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b3aa49299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5d506b251adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5d506b21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b3aa482a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b3aa482a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d506b21aa3a]

Exiting...
23:23:42 (68225): wrapper (7.17.26016): starting
23:23:42 (68225): wrapper (7.17.26016): starting
23:23:42 (68225): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:10:51 (68225): sidock exited; CPU time 3841.305158
01:10:51 (68225): called boinc_finish(0)

</stderr_txt>
]]>


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