Task 527720


Deprecated: Implicit conversion from float-string "17607.94" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424

Deprecated: Implicit conversion from float-string "17607.94" to int loses precision in /home/boincadm/projects/sidock/html/inc/util.inc on line 424
Name ebola_RdRp_v1_sidock_00835319_r7_s-24.0_0
Workunit 461364
Created 12 Sep 2026, 2:01:19 UTC
Sent 12 Sep 2026, 7:18:06 UTC
Report deadline 16 Sep 2026, 7:18:06 UTC
Received 13 Sep 2026, 6:28:53 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 77581
Run time 4 hours 53 min 27 sec
CPU time 4 hours 53 min 27 sec
Validate state Valid
Credit 750.99
Device peak FLOPS 11.93 GFLOPS
Application version SiDock@home CurieMarieDock v1.00
x86_64-pc-linux-gnu
Peak working set size 239.04 MB
Peak swap size 245.86 MB
Peak disk usage 20.46 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:25:55 (2717001): wrapper (7.17.26016): starting
02:25:55 (2717001): wrapper (7.17.26016): starting
02:25:55 (2717001): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f50b8e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76c666045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x76c66609ec0c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x76c66604527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x76c6660288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x76c6660297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa90d5)[0x76c6660a90d5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab46c)[0x76c6660ab46c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x76c6660adeae]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f50b8e5c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f50b8e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76c666045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76c6660ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76c6660f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76c6661299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5f50b8e51adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5f50b8e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76c66602a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76c66602a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f50b8e1aa3a]

Exiting...
13:37:40 (180543): wrapper (7.17.26016): starting
13:37:41 (180543): wrapper (7.17.26016): starting
13:37:41 (180543): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x580ed043ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x742b8bc45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x742b8bc9ec0c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x742b8bc4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x742b8bc288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x742b8bc297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa90d5)[0x742b8bca90d5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab46c)[0x742b8bcab46c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x742b8bcadeae]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x580ed045c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x580ed047b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x742b8bc45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x742b8bcecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x742b8bcf9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x742b8bd299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x580ed0451adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x580ed041e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x742b8bc2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x742b8bc2a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x580ed041aa3a]

Exiting...
13:52:46 (1907): wrapper (7.17.26016): starting
13:52:46 (1907): wrapper (7.17.26016): starting
13:52:46 (1907): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e540263ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73503c045330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x73503c0ade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e540265c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e540267b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x73503c045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x73503c0ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x73503c0f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x73503c1299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5e5402651adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5e540261e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x73503c02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x73503c02a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e540261aa3a]

Exiting...
14:47:43 (1897): wrapper (7.17.26016): starting
14:47:43 (1897): wrapper (7.17.26016): starting
14:47:43 (1897): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f9f2383ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7eca96445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7eca964ade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f9f2385c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f9f2387b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7eca96445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7eca964ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7eca964f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7eca965299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5f9f23851adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5f9f2381e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7eca9642a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7eca9642a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f9f2381aa3a]

Exiting...
18:03:59 (1904): wrapper (7.17.26016): starting
18:03:59 (1904): wrapper (7.17.26016): starting
18:03:59 (1904): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a24a583ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7a14f3845330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7a14f38ade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a24a585c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a24a587b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7a14f3845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7a14f38ecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7a14f38f9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7a14f39299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5a24a5851adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5a24a581e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7a14f382a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7a14f382a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a24a581aa3a]

Exiting...
19:11:20 (1887): wrapper (7.17.26016): starting
19:11:20 (1887): wrapper (7.17.26016): starting
19:11:20 (1887): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a477a23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d278ea45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7d278eaade55]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a477a25c3dd]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a477a27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d278ea45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d278eaecbdf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d278eaf9b27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d278eb299bc]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x51adf)[0x5a477a251adf]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1e784)[0x5a477a21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d278ea2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d278ea2a28b]
../../projects/www.sidock.si_sidock/sidock_wrapper_1.00_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a477a21aa3a]

Exiting...
23:23:42 (68224): wrapper (7.17.26016): starting
23:23:42 (68224): wrapper (7.17.26016): starting
23:23:42 (68224): wrapper: running sidock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:28:43 (68224): sidock exited; CPU time 4451.891683
01:28:43 (68224): called boinc_finish(0)

</stderr_txt>
]]>


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