Task 100061397

Name ebola_RdRp_v1_sidock_00737391_r3_s-24.0_0
Workunit 70491579
Created 14 Mar 2026, 14:19:52 UTC
Sent 17 Mar 2026, 1:29:19 UTC
Report deadline 21 Mar 2026, 1:29:19 UTC
Received 17 Mar 2026, 8:22:31 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 82310
Run time 2 hours 0 min 57 sec
CPU time 2 hours 0 min 49 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 10.45 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.25 MB
Peak swap size 245.82 MB
Peak disk usage 20.36 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:06:20 (17423): wrapper (7.17.26016): starting
07:06:20 (17423): wrapper (7.17.26016): starting
07:06:20 (17423): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:17:26 (3170): wrapper (7.17.26016): starting
09:17:26 (3170): wrapper (7.17.26016): starting
09:17:26 (3170): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x61109963ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77cb69845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x77cb6989eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x77cb6984527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x77cb698288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x77cb698297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x77cb698a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x77cb698ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x77cb698addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x61109965c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x61109967b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77cb69845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77cb698ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77cb698f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77cb6992975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x611099651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x61109961e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77cb6982a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77cb6982a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x61109961aa3a]

Exiting...
09:21:51 (2491): wrapper (7.17.26016): starting
09:21:51 (2491): wrapper (7.17.26016): starting
09:21:51 (2491): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:21:56 (2491): cmdock exited; CPU time 3.998223
09:21:56 (2491): called boinc_finish(0)

</stderr_txt>
]]>


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