Task 100056005

Name ebola_RdRp_v1_sidock_00736057_r2_s-24.0_0
Workunit 70486242
Created 14 Mar 2026, 14:15:16 UTC
Sent 16 Mar 2026, 20:45:15 UTC
Report deadline 20 Mar 2026, 20:45:15 UTC
Received 17 Mar 2026, 13:11:12 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83711
Run time 9 hours 18 min 10 sec
CPU time 9 hours 18 min 10 sec
Validate state Valid
Credit 603.17
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.25 MB
Peak swap size 246.41 MB
Peak disk usage 20.40 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:08:42 (3462484): wrapper (7.17.26016): starting
22:08:42 (3462484): wrapper (7.17.26016): starting
22:08:42 (3462484): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5b6e0ea3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7cd3aae45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7cd3aaeadd75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5b6e0ea5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5b6e0ea7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7cd3aae45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7cd3aaeecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7cd3aaef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7cd3aaf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5b6e0ea51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5b6e0ea1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7cd3aae2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7cd3aae2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5b6e0ea1aa3a]

Exiting...
06:57:58 (3710726): wrapper (7.17.26016): starting
06:57:58 (3710726): wrapper (7.17.26016): starting
06:57:58 (3710726): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:11:00 (3710726): cmdock exited; CPU time 20822.150720
14:11:00 (3710726): called boinc_finish(0)

</stderr_txt>
]]>


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