Task 100055215

Name ebola_RdRp_v1_sidock_00735860_r2_s-24.0_0
Workunit 70485454
Created 14 Mar 2026, 14:14:37 UTC
Sent 16 Mar 2026, 20:07:44 UTC
Report deadline 20 Mar 2026, 20:07:44 UTC
Received 17 Mar 2026, 13:52:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83355
Run time 17 hours 28 min 54 sec
CPU time 17 hours 13 min 19 sec
Validate state Valid
Credit 1,573.68
Device peak FLOPS 3.59 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.12 MB
Peak swap size 246.03 MB
Peak disk usage 20.32 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:19:08 (155230): wrapper (7.17.26016): starting
23:19:08 (155230): wrapper (7.17.26016): starting
23:19:08 (155230): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/natalia/nata-boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a8198e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x794652245330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7946522add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a8198e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a8198e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x794652245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7946522ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7946522f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79465232975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a8198e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a8198e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79465222a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79465222a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a8198e1aa3a]

Exiting...
11:12:56 (4037): wrapper (7.17.26016): starting
11:12:56 (4037): wrapper (7.17.26016): starting
11:12:56 (4037): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/natalia/nata-boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:52:25 (4037): cmdock exited; CPU time 19660.494400
16:52:25 (4037): called boinc_finish(0)

</stderr_txt>
]]>


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