Task 100054884

Name ebola_RdRp_v1_sidock_00735775_r1_s-24.0_0
Workunit 70485113
Created 14 Mar 2026, 14:14:17 UTC
Sent 16 Mar 2026, 19:44:25 UTC
Report deadline 20 Mar 2026, 19:44:25 UTC
Received 17 Mar 2026, 12:36:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 70595
Run time 7 hours 26 min 35 sec
CPU time 7 hours 26 min 35 sec
Validate state Valid
Credit 1,213.32
Device peak FLOPS 8.66 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.98 MB
Peak swap size 247.56 MB
Peak disk usage 20.37 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
14:44:35 (11930): wrapper (7.17.26016): starting
14:44:35 (11930): wrapper (7.17.26016): starting
14:44:35 (11930): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5dcfa2a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x755f59245f60]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x17) [0x755f592b5d27]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5dcfa2a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5dcfa2a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x755f59245f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x755f592ac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x755f592a00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x755f592f6372]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x755f59304057]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x755f59336f6a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5dcfa2a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5dcfa2a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x755f5922a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x755f5922a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5dcfa2a1aa3a]

Exiting...
23:31:41 (2674): wrapper (7.17.26016): starting
23:31:41 (2674): wrapper (7.17.26016): starting
23:31:41 (2674): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
07:36:22 (2674): cmdock exited; CPU time 7479.165087
07:36:22 (2674): called boinc_finish(0)

</stderr_txt>
]]>


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