Task 100051410

Name ebola_RdRp_v1_sidock_00734914_r1_s-24.0_0
Workunit 70481669
Created 14 Mar 2026, 14:11:18 UTC
Sent 16 Mar 2026, 17:13:03 UTC
Report deadline 20 Mar 2026, 17:13:03 UTC
Received 17 Mar 2026, 7:32:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83711
Run time 9 hours 3 min 58 sec
CPU time 9 hours 3 min 58 sec
Validate state Valid
Credit 599.59
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.57 MB
Peak swap size 246.57 MB
Peak disk usage 20.46 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
18:34:02 (3426911): wrapper (7.17.26016): starting
18:34:02 (3426911): wrapper (7.17.26016): starting
18:34:02 (3426911): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x629410c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b1554645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7b15546add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x629410c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x629410c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b1554645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b15546ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b15546f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b155472975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x629410c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x629410c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b155462a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b155462a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x629410c1aa3a]

Exiting...
06:57:58 (3710722): wrapper (7.17.26016): starting
06:57:58 (3710722): wrapper (7.17.26016): starting
06:57:58 (3710722): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
08:32:37 (3710722): cmdock exited; CPU time 4554.662764
08:32:37 (3710722): called boinc_finish(0)

</stderr_txt>
]]>


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