Task 100049549

Name ebola_RdRp_v1_sidock_00734452_r1_s-24.0_0
Workunit 70479821
Created 14 Mar 2026, 14:09:41 UTC
Sent 16 Mar 2026, 15:40:59 UTC
Report deadline 20 Mar 2026, 15:40:59 UTC
Received 17 Mar 2026, 17:58:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83692
Run time 16 hours 21 min 16 sec
CPU time 15 hours 59 min 23 sec
Validate state Valid
Credit 552.94
Device peak FLOPS 5.51 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.03 MB
Peak swap size 246.51 MB
Peak disk usage 20.31 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:19:38 (2477571): wrapper (7.17.26016): starting
01:19:38 (2477571): wrapper (7.17.26016): starting
01:19:38 (2477571): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x58199543ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7c83ede45f60]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11d) [0x7c83edea5fed]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x7c83ede45e2e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x27) [0x7c83ede28888]
/lib/x86_64-linux-gnu/libc.so.6(+0x29915) [0x7c83ede29915]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08a5) [0x7c83edeb08a5]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08c4) [0x7c83edeb08c4]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x58199545c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x58199547b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x7c83ede45f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x7c83edeac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x7c83edea00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x7c83edef6372]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x7c83edf04057]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x7c83edf36f6a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x581995451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x58199541e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x7c83ede2a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x7c83ede2a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x58199541aa3a]

Exiting...
14:22:18 (2358): wrapper (7.17.26016): starting
14:22:18 (2358): wrapper (7.17.26016): starting
14:22:18 (2358): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:58:43 (2358): cmdock exited; CPU time 12233.268058
17:58:43 (2358): called boinc_finish(0)

</stderr_txt>
]]>


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