Task 100048487

Name ebola_RdRp_v1_sidock_00734191_r4_s-24.0_0
Workunit 70478780
Created 14 Mar 2026, 14:08:45 UTC
Sent 16 Mar 2026, 14:53:20 UTC
Report deadline 20 Mar 2026, 14:53:20 UTC
Received 17 Mar 2026, 16:48:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83692
Run time 16 hours 58 min 19 sec
CPU time 16 hours 33 min 35 sec
Validate state Valid
Credit 576.14
Device peak FLOPS 5.51 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.95 MB
Peak swap size 246.42 MB
Peak disk usage 20.47 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
23:32:40 (2466785): wrapper (7.17.26016): starting
23:32:40 (2466785): wrapper (7.17.26016): starting
23:32:40 (2466785): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x5905f3c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x797b57e45f60]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11d) [0x797b57ea5fed]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e) [0x797b57e45e2e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x27) [0x797b57e28888]
/lib/x86_64-linux-gnu/libc.so.6(+0x29915) [0x797b57e29915]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08a5) [0x797b57eb08a5]
/lib/x86_64-linux-gnu/libc.so.6(+0xb08c4) [0x797b57eb08c4]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x5905f3c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x5905f3c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45f60) [0x797b57e45f60]
/lib/x86_64-linux-gnu/libc.so.6(+0xac772) [0x797b57eac772]
/lib/x86_64-linux-gnu/libc.so.6(+0xa00ac) [0x797b57ea00ac]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x32) [0x797b57ef6372]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17) [0x797b57f04057]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4a) [0x797b57f36f6a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x5905f3c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x5905f3c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a575) [0x797b57e2a575]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x88) [0x797b57e2a628]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x5905f3c1aa3a]

Exiting...
14:22:18 (2357): wrapper (7.17.26016): starting
14:22:18 (2357): wrapper (7.17.26016): starting
14:22:18 (2357): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:48:00 (2357): cmdock exited; CPU time 7962.089683
16:48:00 (2357): called boinc_finish(0)

</stderr_txt>
]]>


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