Task 100042330

Name ebola_RdRp_v1_sidock_00732650_r4_s-24.0_0
Workunit 70472616
Created 14 Mar 2026, 14:03:29 UTC
Sent 16 Mar 2026, 9:31:04 UTC
Report deadline 20 Mar 2026, 9:31:04 UTC
Received 17 Mar 2026, 17:25:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 76200
Run time 7 hours 10 min 29 sec
CPU time 7 hours 10 min 24 sec
Validate state Valid
Credit 546.84
Device peak FLOPS 10.36 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.34 MB
Peak swap size 246.80 MB
Peak disk usage 20.41 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:28:29 (333944): wrapper (7.17.26016): starting
00:28:29 (333944): wrapper (7.17.26016): starting
00:28:29 (333944): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f4bdee3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b5513045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7b551309eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7b551304527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7b55130288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7b55130297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7b55130a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7b55130ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7b55130addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f4bdee5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f4bdee7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b5513045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b55130ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b55130f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b551312975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f4bdee51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f4bdee1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b551302a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b551302a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f4bdee1aa3a]

Exiting...
09:50:02 (409676): wrapper (7.17.26016): starting
09:50:02 (409676): wrapper (7.17.26016): starting
09:50:02 (409676): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/20/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:24:55 (409676): cmdock exited; CPU time 8483.260092
12:24:55 (409676): called boinc_finish(0)

</stderr_txt>
]]>


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