Task 100042104

Name ebola_RdRp_v1_sidock_00732599_r3_s-24.0_0
Workunit 70472411
Created 14 Mar 2026, 14:03:15 UTC
Sent 16 Mar 2026, 9:14:38 UTC
Report deadline 20 Mar 2026, 9:14:38 UTC
Received 17 Mar 2026, 23:30:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 19139
Run time 23 hours 10 min 1 sec
CPU time 22 hours 45 min 46 sec
Validate state Valid
Credit 568.26
Device peak FLOPS 3.69 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.37 MB
Peak swap size 245.66 MB
Peak disk usage 20.41 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
07:16:43 (889554): wrapper (7.17.26016): starting
07:16:43 (889554): wrapper (7.17.26016): starting
07:16:43 (889554): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55bae3713f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fd6432fc420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fd64313900b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fd643118859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d266)[0x7fd643183266]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7fd64318b2fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7fd64318cb2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55bae37303dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55bae374f8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fd643139090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fd6431d323f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fd6431d8ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fd64320ba7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55bae3725adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55bae36f2784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fd64311a083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55bae36eea3a]

Exiting...
08:34:07 (2452): wrapper (7.17.26016): starting
08:34:07 (2452): wrapper (7.17.26016): starting
08:34:07 (2452): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:30:14 (2452): cmdock exited; CPU time 77589.928225
06:30:14 (2452): called boinc_finish(0)

</stderr_txt>
]]>


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