Task 100040760

Name ebola_RdRp_v1_sidock_00732260_r3_s-24.0_0
Workunit 70471055
Created 14 Mar 2026, 14:02:07 UTC
Sent 16 Mar 2026, 8:09:52 UTC
Report deadline 20 Mar 2026, 8:09:52 UTC
Received 17 Mar 2026, 10:27:44 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 44760
Run time 19 hours 50 min 16 sec
CPU time 17 hours 37 min 13 sec
Validate state Valid
Credit 586.55
Device peak FLOPS 5.02 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.37 MB
Peak swap size 246.43 MB
Peak disk usage 20.32 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:33:33 (1626586): wrapper (7.17.26016): starting
17:33:34 (1626586): wrapper (7.17.26016): starting
17:33:34 (1626586): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x616cfd83ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x788bbe245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x788bbe29eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x788bbe24527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x788bbe2288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x788bbe2297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x788bbe2a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x788bbe2ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x788bbe2addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x616cfd85c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x616cfd87b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x788bbe245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x788bbe2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x788bbe2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x788bbe32975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x616cfd851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x616cfd81e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x788bbe22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x788bbe22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x616cfd81aa3a]

Exiting...
06:51:25 (145291): wrapper (7.17.26016): starting
06:51:25 (145291): wrapper (7.17.26016): starting
06:51:25 (145291): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:27:33 (145291): cmdock exited; CPU time 21088.553469
13:27:33 (145291): called boinc_finish(0)

</stderr_txt>
]]>


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