Task 100039477

Name ebola_RdRp_v1_sidock_00731947_r3_s-24.0_0
Workunit 70469803
Created 14 Mar 2026, 14:01:02 UTC
Sent 16 Mar 2026, 7:06:51 UTC
Report deadline 20 Mar 2026, 7:06:51 UTC
Received 16 Mar 2026, 19:24:02 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 69180
Run time 4 hours 7 min 18 sec
CPU time 4 hours 1 min 43 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.64 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.00 MB
Peak swap size 246.91 MB
Peak disk usage 20.35 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
01:02:47 (2718461): wrapper (7.17.26016): starting
01:02:47 (2718461): wrapper (7.17.26016): starting
01:02:47 (2718461): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f608b63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7cce7c045330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7cce7c0add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f608b65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f608b67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7cce7c045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7cce7c0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7cce7c0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7cce7c12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f608b651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f608b61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7cce7c02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7cce7c02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f608b61aa3a]

Exiting...
11:50:16 (4640): wrapper (7.17.26016): starting
11:50:16 (4640): wrapper (7.17.26016): starting
11:50:16 (4640): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6520eec3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fd775445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7fd7754add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6520eec5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6520eec7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fd775445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7fd7754ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fd7754f9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x7fd77550ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x6520eec51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6520eec1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fd77542a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fd77542a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6520eec1aa3a]

Exiting...
12:23:44 (14825): wrapper (7.17.26016): starting
12:23:44 (14825): wrapper (7.17.26016): starting
12:23:44 (14825): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:23:53 (14825): cmdock exited; CPU time 8.644048
12:23:53 (14825): called boinc_finish(0)

</stderr_txt>
]]>


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