Task 100036872

Name ebola_RdRp_v1_sidock_00731297_r1_s-24.0_0
Workunit 70467201
Created 14 Mar 2026, 13:58:48 UTC
Sent 16 Mar 2026, 4:36:32 UTC
Report deadline 20 Mar 2026, 4:36:32 UTC
Received 17 Mar 2026, 9:13:02 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 81825
Run time 3 sec
CPU time 3 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.53 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 38.75 MB
Peak swap size 46.09 MB
Peak disk usage 20.21 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:45:24 (8942): wrapper (7.17.26016): starting
16:45:24 (8942): wrapper (7.17.26016): starting
16:45:24 (8942): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x58739a23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x790559445330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7905594add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x58739a25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x58739a27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x790559445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7905594ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7905594f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x79055952975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x58739a251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x58739a21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x79055942a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x79055942a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x58739a21aa3a]

Exiting...
10:12:20 (10134): wrapper (7.17.26016): starting
10:12:20 (10134): wrapper (7.17.26016): starting
10:12:20 (10134): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
10:12:50 (10134): cmdock exited; CPU time 3.274064
10:12:50 (10134): called boinc_finish(0)

</stderr_txt>
]]>


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