Task 100036811

Name ebola_RdRp_v1_sidock_00731282_r1_s-24.0_0
Workunit 70467141
Created 14 Mar 2026, 13:58:45 UTC
Sent 16 Mar 2026, 4:33:07 UTC
Report deadline 20 Mar 2026, 4:33:07 UTC
Received 17 Mar 2026, 18:25:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60274
Run time 7 hours 43 min 57 sec
CPU time 7 hours 43 min 51 sec
Validate state Valid
Credit 538.81
Device peak FLOPS 9.95 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.79 MB
Peak swap size 245.88 MB
Peak disk usage 20.39 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
22:02:59 (99843): wrapper (7.17.26016): starting
22:02:59 (99843): wrapper (7.17.26016): starting
22:02:59 (99843): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ce24763ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76ecada45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x76ecada9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x76ecada4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x76ecada288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x76ecada297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x76ecadaa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x76ecadaab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x76ecadaaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ce24765c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ce24767b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76ecada45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76ecadaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76ecadaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76ecadb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ce247651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ce24761e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76ecada2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76ecada2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ce24761aa3a]

Exiting...
09:45:03 (188576): wrapper (7.17.26016): starting
09:45:03 (188576): wrapper (7.17.26016): starting
09:45:03 (188576): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:24:53 (188576): cmdock exited; CPU time 7736.243267
13:24:53 (188576): called boinc_finish(0)

</stderr_txt>
]]>


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