Task 100033485

Name ebola_RdRp_v1_sidock_00730454_r1_s-24.0_0
Workunit 70463829
Created 14 Mar 2026, 13:55:55 UTC
Sent 16 Mar 2026, 1:41:58 UTC
Report deadline 20 Mar 2026, 1:41:58 UTC
Received 17 Mar 2026, 6:34:53 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 44760
Run time 19 hours 49 min 35 sec
CPU time 17 hours 38 min 51 sec
Validate state Valid
Credit 597.85
Device peak FLOPS 5.02 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.76 MB
Peak swap size 245.59 MB
Peak disk usage 20.40 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:43:08 (3818169): wrapper (7.17.26016): starting
13:43:09 (3818169): wrapper (7.17.26016): starting
13:43:09 (3818169): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62a854c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e70b6e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7e70b6e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7e70b6e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7e70b6e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7e70b6e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7e70b6ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7e70b6eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7e70b6eaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62a854c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62a854c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e70b6e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7e70b6eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7e70b6ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7e70b6f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62a854c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62a854c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7e70b6e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7e70b6e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62a854c1aa3a]

Exiting...
06:51:25 (145288): wrapper (7.17.26016): starting
06:51:25 (145288): wrapper (7.17.26016): starting
06:51:25 (145288): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:34:39 (145288): cmdock exited; CPU time 8737.204103
09:34:39 (145288): called boinc_finish(0)

</stderr_txt>
]]>


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