Task 100032961

Name ebola_RdRp_v1_sidock_00730307_r3_s-24.0_0
Workunit 70463243
Created 14 Mar 2026, 13:55:28 UTC
Sent 16 Mar 2026, 1:13:23 UTC
Report deadline 20 Mar 2026, 1:13:23 UTC
Received 17 Mar 2026, 17:45:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 83167
Run time 17 hours 2 min 8 sec
CPU time 17 hours 2 min 8 sec
Validate state Valid
Credit 1,056.18
Device peak FLOPS 4.35 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.86 MB
Peak swap size 246.88 MB
Peak disk usage 20.31 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:15:09 (26631): wrapper (7.17.26016): starting
14:15:09 (26631): wrapper (7.17.26016): starting
14:15:09 (26631): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x60b5d863ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c675e645330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7c675e6add75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x60b5d865c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x60b5d867b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c675e645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c675e6ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c675e6f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c675e72975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x60b5d8651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x60b5d861e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c675e62a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c675e62a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x60b5d861aa3a]

Exiting...
11:24:35 (1581): wrapper (7.17.26016): starting
11:24:36 (1581): wrapper (7.17.26016): starting
11:24:36 (1581): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:45:21 (1581): cmdock exited; CPU time 15862.156855
18:45:21 (1581): called boinc_finish(0)

</stderr_txt>
]]>


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