Task 100023761

Name ebola_RdRp_v1_sidock_00728007_r1_s-24.0_0
Workunit 70454041
Created 14 Mar 2026, 13:47:38 UTC
Sent 15 Mar 2026, 17:30:13 UTC
Report deadline 19 Mar 2026, 17:30:13 UTC
Received 17 Mar 2026, 6:24:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60274
Run time 8 hours 9 min 29 sec
CPU time 8 hours 9 min 20 sec
Validate state Valid
Credit 585.10
Device peak FLOPS 9.95 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.17 MB
Peak swap size 246.09 MB
Peak disk usage 20.42 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:36:32 (6225): wrapper (7.17.26016): starting
09:36:32 (6225): wrapper (7.17.26016): starting
09:36:32 (6225): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59514363ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e1cc5445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7e1cc549eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7e1cc544527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7e1cc54288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7e1cc54297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7e1cc54a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7e1cc54ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7e1cc54addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59514365c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59514367b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7e1cc5445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7e1cc54ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7e1cc54f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7e1cc552975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x595143651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59514361e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7e1cc542a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7e1cc542a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59514361aa3a]

Exiting...
21:07:32 (93196): wrapper (7.17.26016): starting
21:07:32 (93196): wrapper (7.17.26016): starting
21:07:32 (93196): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:24:47 (93196): cmdock exited; CPU time 12679.419454
01:24:47 (93196): called boinc_finish(0)

</stderr_txt>
]]>


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