Task 100023112

Name ebola_RdRp_v1_sidock_00727847_r3_s-24.0_0
Workunit 70453403
Created 14 Mar 2026, 13:47:06 UTC
Sent 15 Mar 2026, 16:59:28 UTC
Report deadline 19 Mar 2026, 16:59:28 UTC
Received 17 Mar 2026, 21:33:24 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 59007
Run time 42 sec
CPU time 39 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.08 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 34.09 MB
Peak swap size 41.41 MB
Peak disk usage 20.20 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
14:30:04 (1023078): wrapper (7.17.26016): starting
14:30:04 (1023078): wrapper (7.17.26016): starting
14:30:04 (1023078): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56384ca3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f3507484050]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x1a)[0x7f35074e0efa]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56384ca5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56384ca7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7f3507484050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7f3507517545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7f350751be53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7f3507547285]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56384ca51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56384ca1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7f350746f24a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7f350746f305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56384ca1aa3a]

Exiting...
18:32:32 (1426830): wrapper (7.17.26016): starting
18:32:32 (1426830): wrapper (7.17.26016): starting
18:32:32 (1426830): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:33:13 (1426830): cmdock exited; CPU time 39.400789
18:33:13 (1426830): called boinc_finish(0)

</stderr_txt>
]]>


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