Task 100017415

Name ebola_RdRp_v1_sidock_00726437_r4_s-24.0_0
Workunit 70447764
Created 14 Mar 2026, 13:42:11 UTC
Sent 15 Mar 2026, 11:54:53 UTC
Report deadline 19 Mar 2026, 11:54:53 UTC
Received 15 Mar 2026, 20:23:24 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 83490
Run time 6 hours 5 min 11 sec
CPU time 5 hours 59 min 5 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 3.79 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.82 MB
Peak swap size 245.83 MB
Peak disk usage 20.34 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:54:56 (6885): wrapper (7.17.26016): starting
14:54:56 (6885): wrapper (7.17.26016): starting
14:54:56 (6885): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x599588e3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d5389a45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7d5389aadd75]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x599588e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x599588e7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d5389a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d5389aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d5389af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d5389b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x599588e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x599588e1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d5389a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d5389a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x599588e1aa3a]

Exiting...
23:13:29 (2801): wrapper (7.17.26016): starting
23:13:29 (2801): wrapper (7.17.26016): starting
23:13:29 (2801): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:21:08 (2798): wrapper (7.17.26016): starting
23:21:08 (2798): wrapper (7.17.26016): starting
23:21:08 (2798): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
23:22:49 (2798): cmdock exited; CPU time 2.834174
23:22:49 (2798): called boinc_finish(0)

</stderr_txt>
]]>


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