Task 100011229

Name ebola_RdRp_v1_sidock_00724876_r3_s-24.0_0
Workunit 70441519
Created 14 Mar 2026, 13:36:51 UTC
Sent 15 Mar 2026, 6:50:58 UTC
Report deadline 19 Mar 2026, 6:50:58 UTC
Received 16 Mar 2026, 11:06:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 84060
Run time 19 hours 10 min 50 sec
CPU time 19 hours 5 min 46 sec
Validate state Valid
Credit 566.51
Device peak FLOPS 5.26 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.56 MB
Peak swap size 246.29 MB
Peak disk usage 20.44 MB

Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
16:48:34 (15030): wrapper (7.17.26016): starting
16:48:35 (15030): wrapper (7.17.26016): starting
16:48:35 (15030): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55d8f3e3ff8c]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x40a70) [0x7f4bdc8aca70]
/usr/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x13) [0x7f4bdc912253]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55d8f3e5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55d8f3e7b8e4]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x40a70) [0x7f4bdc8aca70]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x9d6be) [0x7f4bdc9096be]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x91e64) [0x7f4bdc8fde64]
/usr/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f4bdc94b0fa]
/usr/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f4bdc9566f3]
/usr/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f4bdc97f893]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55d8f3e51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55d8f3e1e784]
/usr/lib/x86_64-linux-gnu/libc.so.6(+0x29f75) [0x7f4bdc895f75]
/usr/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x87) [0x7f4bdc896027]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55d8f3e1aa3a]

Exiting...
08:45:39 (3478): wrapper (7.17.26016): starting
08:45:39 (3478): wrapper (7.17.26016): starting
08:45:39 (3478): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:06:09 (3478): cmdock exited; CPU time 11955.080098
12:06:09 (3478): called boinc_finish(0)

</stderr_txt>
]]>


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