Task 100010460

Name ebola_RdRp_v1_sidock_00724695_r3_s-24.0_0
Workunit 70440795
Created 14 Mar 2026, 13:36:11 UTC
Sent 15 Mar 2026, 6:12:29 UTC
Report deadline 19 Mar 2026, 6:12:29 UTC
Received 17 Mar 2026, 8:24:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 78592
Run time 12 hours 39 min 49 sec
CPU time 12 hours 39 min 43 sec
Validate state Valid
Credit 600.50
Device peak FLOPS 7.41 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.59 MB
Peak swap size 246.17 MB
Peak disk usage 20.27 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:59:28 (326129): wrapper (7.17.26016): starting
03:59:28 (326129): wrapper (7.17.26016): starting
03:59:28 (326129): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6416cae3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c03dca45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c03dca9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c03dca4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c03dca288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c03dca297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7c03dcaa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7c03dcaab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c03dcaaddce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6416cae5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6416cae7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c03dca45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c03dcaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c03dcaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c03dcb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6416cae51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6416cae1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c03dca2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c03dca2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6416cae1aa3a]

Exiting...
00:36:40 (2493): wrapper (7.17.26016): starting
00:36:40 (2493): wrapper (7.17.26016): starting
00:36:40 (2493): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:29:36 (169225): wrapper (7.17.26016): starting
21:29:36 (169225): wrapper (7.17.26016): starting
21:29:36 (169225): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/32/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:23:57 (169225): cmdock exited; CPU time 16327.812035
03:23:57 (169225): called boinc_finish(0)

</stderr_txt>
]]>


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