Task 100005827

Name ebola_RdRp_v1_sidock_00723530_r4_s-24.0_0
Workunit 70436136
Created 14 Mar 2026, 13:32:13 UTC
Sent 15 Mar 2026, 2:24:59 UTC
Report deadline 19 Mar 2026, 2:24:59 UTC
Received 16 Mar 2026, 6:11:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54588
Run time 8 hours 17 min 49 sec
CPU time 8 hours 17 min 40 sec
Validate state Valid
Credit 570.28
Device peak FLOPS 9.84 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.88 MB
Peak swap size 245.63 MB
Peak disk usage 20.28 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
22:15:22 (654667): wrapper (7.17.26016): starting
22:15:22 (654667): wrapper (7.17.26016): starting
22:15:22 (654667): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57f9d2a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7777f4045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7777f409eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7777f404527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7777f40288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7777f40297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7777f40a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7777f40ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7777f40addce]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57f9d2a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57f9d2a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7777f4045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7777f40ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7777f40f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7777f412975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57f9d2a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57f9d2a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7777f402a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7777f402a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57f9d2a1aa3a]

Exiting...
21:00:02 (108162): wrapper (7.17.26016): starting
21:00:02 (108162): wrapper (7.17.26016): starting
21:00:02 (108162): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:10:56 (108162): cmdock exited; CPU time 14510.934057
01:10:56 (108162): called boinc_finish(0)

</stderr_txt>
]]>


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